WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H2.2a.1 Sequence Name  F52H2.2a.1
Length (nt)  1750   Chromosome Location  X: 2554231-2557736
Chromosome . Primary Identifier  X Chromosome Location . Start  2554231
Chromosome Location . End  2557736 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H2.2a F52H2.2a 1482   X: 2554238-2554297

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.2a.1 2554231 2557736 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226071   67   X: 2554231-2554297 Caenorhabditis elegans
Exon226072   118   X: 2554358-2554475 Caenorhabditis elegans
Exon226074   190   X: 2555065-2555254 Caenorhabditis elegans
Exon226076   116   X: 2555312-2555427 Caenorhabditis elegans
Exon226078   126   X: 2555495-2555620 Caenorhabditis elegans
Exon226080   154   X: 2555673-2555826 Caenorhabditis elegans
Exon226082   124   X: 2555883-2556006 Caenorhabditis elegans
Exon226084   104   X: 2556054-2556157 Caenorhabditis elegans
Exon226086   97   X: 2556891-2556987 Caenorhabditis elegans
Exon226088   331   X: 2557036-2557366 Caenorhabditis elegans
Exon226091   323   X: 2557414-2557736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.2a.1 2554231 2557736 1

1 Sequence

Length
1750

1 Sequence Ontology Term

Identifier Name Description
transcript