WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H2.2b.1 Sequence Name  F52H2.2b.1
Length (nt)  2020   Chromosome Location  X: 2552260-2557729
Chromosome . Primary Identifier  X Chromosome Location . Start  2552260
Chromosome Location . End  2557729 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H2.2b F52H2.2b 1590   X: 2552436-2552536

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.2b.1 2552260 2557729 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226064   277   X: 2552260-2552536 Caenorhabditis elegans
Exon226070   67   X: 2554231-2554297 Caenorhabditis elegans
Exon226073   118   X: 2554358-2554475 Caenorhabditis elegans
Exon226075   190   X: 2555065-2555254 Caenorhabditis elegans
Exon226077   116   X: 2555312-2555427 Caenorhabditis elegans
Exon226079   126   X: 2555495-2555620 Caenorhabditis elegans
Exon226081   154   X: 2555673-2555826 Caenorhabditis elegans
Exon226083   124   X: 2555883-2556006 Caenorhabditis elegans
Exon226085   104   X: 2556054-2556157 Caenorhabditis elegans
Exon226087   97   X: 2556891-2556987 Caenorhabditis elegans
Exon226089   331   X: 2557036-2557366 Caenorhabditis elegans
Exon226090   316   X: 2557414-2557729 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.2b.1 2552260 2557729 1

1 Sequence

Length
2020

1 Sequence Ontology Term

Identifier Name Description
transcript