WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H2.4.1 Sequence Name  F52H2.4.1
Length (nt)  1965   Chromosome Location  X: 2543180-2548984
Chromosome . Primary Identifier  X Chromosome Location . Start  2543180
Chromosome Location . End  2548984 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018716 smvt-1 F52H2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H2.4 F52H2.4 1698   X: 2543429-2543559

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.4.1 2543180 2548984 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226048   380   X: 2543180-2543559 Caenorhabditis elegans
Exon226049   104   X: 2544778-2544881 Caenorhabditis elegans
Exon226050   95   X: 2544926-2545020 Caenorhabditis elegans
Exon226051   159   X: 2545068-2545226 Caenorhabditis elegans
Exon226052   71   X: 2545277-2545347 Caenorhabditis elegans
Exon226053   128   X: 2545992-2546119 Caenorhabditis elegans
Exon226054   207   X: 2546165-2546371 Caenorhabditis elegans
Exon226055   141   X: 2546432-2546572 Caenorhabditis elegans
Exon226056   152   X: 2546864-2547015 Caenorhabditis elegans
Exon226057   123   X: 2547062-2547184 Caenorhabditis elegans
Exon226058   63   X: 2547813-2547875 Caenorhabditis elegans
Exon226059   120   X: 2547927-2548046 Caenorhabditis elegans
Exon226060   79   X: 2548669-2548747 Caenorhabditis elegans
Exon226061   143   X: 2548842-2548984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.4.1 2543180 2548984 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript