WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48B9.5.1 Sequence Name  F48B9.5.1
Length (nt)  1891   Chromosome Location  X: 2147279-2150106
Chromosome . Primary Identifier  X Chromosome Location . Start  2147279
Chromosome Location . End  2150106 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48B9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018591 npax-2 F48B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48B9.5 F48B9.5 702   X: 2147614-2147671

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48B9.5.1 2147279 2150106 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225208   393   X: 2147279-2147671 Caenorhabditis elegans
Exon225209   102   X: 2147718-2147819 Caenorhabditis elegans
Exon225210   87   X: 2147866-2147952 Caenorhabditis elegans
Exon225211   74   X: 2147999-2148072 Caenorhabditis elegans
Exon225212   83   X: 2148123-2148205 Caenorhabditis elegans
Exon225213   133   X: 2148824-2148956 Caenorhabditis elegans
Exon225214   96   X: 2149004-2149099 Caenorhabditis elegans
Exon225215   923   X: 2149184-2150106 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48B9.5.1 2147279 2150106 -1

1 Sequence

Length
1891

1 Sequence Ontology Term

Identifier Name Description
transcript