WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B1.8a.1 Sequence Name  F53B1.8a.1
Length (nt)  3156   Chromosome Location  X: 2123413-2130241
Chromosome . Primary Identifier  X Chromosome Location . Start  2123413
Chromosome Location . End  2130241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B1.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018739 F53B1.8 F53B1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B1.8a F53B1.8a 2406   X: 2124111-2124191

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53B1.8a.1 2123413 2130241 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225179   779   X: 2123413-2124191 Caenorhabditis elegans
Exon225181   156   X: 2125013-2125168 Caenorhabditis elegans
Exon225183   321   X: 2125217-2125537 Caenorhabditis elegans
Exon225187   190   X: 2125878-2126067 Caenorhabditis elegans
Exon225189   445   X: 2126120-2126564 Caenorhabditis elegans
Exon225191   251   X: 2127033-2127283 Caenorhabditis elegans
Exon225193   322   X: 2127334-2127655 Caenorhabditis elegans
Exon225195   292   X: 2127817-2128108 Caenorhabditis elegans
Exon225198   150   X: 2128535-2128684 Caenorhabditis elegans
Exon225201   82   X: 2129770-2129851 Caenorhabditis elegans
Exon225202   168   X: 2130074-2130241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53B1.8a.1 2123413 2130241 -1

1 Sequence

Length
3156

1 Sequence Ontology Term

Identifier Name Description
transcript