WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H12.1b.1 Sequence Name  F49H12.1b.1
Length (nt)  1598   Chromosome Location  X: 2090005-2093256
Chromosome . Primary Identifier  X Chromosome Location . Start  2090005
Chromosome Location . End  2093256 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003087 lsy-2 F49H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H12.1b F49H12.1b 1020   X: 2090056-2090145

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49H12.1b.1 2090005 2093256 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225111   141   X: 2090005-2090145 Caenorhabditis elegans
Exon225113   106   X: 2090197-2090302 Caenorhabditis elegans
Exon225115   157   X: 2090355-2090511 Caenorhabditis elegans
Exon225117   84   X: 2090927-2091010 Caenorhabditis elegans
Exon225119   96   X: 2091062-2091157 Caenorhabditis elegans
Exon225121   177   X: 2091217-2091393 Caenorhabditis elegans
Exon225123   109   X: 2092263-2092371 Caenorhabditis elegans
Exon225125   96   X: 2092473-2092568 Caenorhabditis elegans
Exon225127   632   X: 2092625-2093256 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49H12.1b.1 2090005 2093256 1

1 Sequence

Length
1598

1 Sequence Ontology Term

Identifier Name Description
transcript