WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H12.1a.1 Sequence Name  F49H12.1a.1
Length (nt)  1718   Chromosome Location  X: 2089704-2093253
Chromosome . Primary Identifier  X Chromosome Location . Start  2089704
Chromosome Location . End  2093253 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003087 lsy-2 F49H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H12.1a F49H12.1a 1098   X: 2089800-2089826

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49H12.1a.1 2089704 2093253 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225109   123   X: 2089704-2089826 Caenorhabditis elegans
Exon225110   141   X: 2090005-2090145 Caenorhabditis elegans
Exon225112   106   X: 2090197-2090302 Caenorhabditis elegans
Exon225114   157   X: 2090355-2090511 Caenorhabditis elegans
Exon225116   84   X: 2090927-2091010 Caenorhabditis elegans
Exon225118   96   X: 2091062-2091157 Caenorhabditis elegans
Exon225120   177   X: 2091217-2091393 Caenorhabditis elegans
Exon225122   109   X: 2092263-2092371 Caenorhabditis elegans
Exon225124   96   X: 2092473-2092568 Caenorhabditis elegans
Exon225126   629   X: 2092625-2093253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49H12.1a.1 2089704 2093253 1

1 Sequence

Length
1718

1 Sequence Ontology Term

Identifier Name Description
transcript