WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199087 Gene Name  D1005.8
Sequence Name  ? D1005.8 Organism  Caenorhabditis elegans
Automated Description  Enriched in VC neuron; VC1; and VC6 based on single-cell RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 97
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199087

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1005.8 D1005.8 97   X: 1467764-1467860
 

Other

0 CDSs

0 RNAi Result

6 Allele

Public Name
gk963725
gk964444
gk964445
WBVar01600549
gk528931
gk489404

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199087 1467764 1467860 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_1467861..1470679   2819 X: 1467861-1470679 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Single-cell RNA-Seq cell group 98_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:98_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199087 1467764 1467860 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
97

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_1464800..1467763   2964 X: 1464800-1467763 Caenorhabditis elegans