WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H42K12.1a.1 Sequence Name  H42K12.1a.1
Length (nt)  2402   Chromosome Location  X: 1321353-1327986
Chromosome . Primary Identifier  X Chromosome Location . Start  1321353
Chromosome Location . End  1327986 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H42K12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003965 pdk-1 H42K12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H42K12.1a H42K12.1a 1899   X: 1321363-1321449

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H42K12.1a.1 1321353 1327986 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223957   97   X: 1321353-1321449 Caenorhabditis elegans
Exon223958   159   X: 1322173-1322331 Caenorhabditis elegans
Exon223960   196   X: 1324383-1324578 Caenorhabditis elegans
Exon223962   333   X: 1324696-1325028 Caenorhabditis elegans
Exon223965   88   X: 1325075-1325162 Caenorhabditis elegans
Exon223966   166   X: 1325212-1325377 Caenorhabditis elegans
Exon223968   242   X: 1325429-1325670 Caenorhabditis elegans
Exon223971   51   X: 1326079-1326129 Caenorhabditis elegans
Exon223972   289   X: 1326180-1326468 Caenorhabditis elegans
Exon223974   168   X: 1326540-1326707 Caenorhabditis elegans
Exon223977   613   X: 1327374-1327986 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H42K12.1a.1 1321353 1327986 1

1 Sequence

Length
2402

1 Sequence Ontology Term

Identifier Name Description
transcript