WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H42K12.1b.1 Sequence Name  H42K12.1b.1
Length (nt)  2422   Chromosome Location  X: 1321344-1327985
Chromosome . Primary Identifier  X Chromosome Location . Start  1321344
Chromosome Location . End  1327985 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H42K12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003965 pdk-1 H42K12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H42K12.1b H42K12.1b 1911   X: 1321363-1321449

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H42K12.1b.1 1321344 1327985 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223956   106   X: 1321344-1321449 Caenorhabditis elegans
Exon223959   159   X: 1322173-1322331 Caenorhabditis elegans
Exon223961   196   X: 1324383-1324578 Caenorhabditis elegans
Exon223963   333   X: 1324696-1325028 Caenorhabditis elegans
Exon223964   94   X: 1325069-1325162 Caenorhabditis elegans
Exon223967   166   X: 1325212-1325377 Caenorhabditis elegans
Exon223969   242   X: 1325429-1325670 Caenorhabditis elegans
Exon223970   57   X: 1326073-1326129 Caenorhabditis elegans
Exon223973   289   X: 1326180-1326468 Caenorhabditis elegans
Exon223975   168   X: 1326540-1326707 Caenorhabditis elegans
Exon223976   612   X: 1327374-1327985 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H42K12.1b.1 1321344 1327985 1

1 Sequence

Length
2422

1 Sequence Ontology Term

Identifier Name Description
transcript