WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D9.3a.1 Sequence Name  C05D9.3a.1
Length (nt)  1680   Chromosome Location  X: 1111903-1116855
Chromosome . Primary Identifier  X Chromosome Location . Start  1111903
Chromosome Location . End  1116855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015472 C05D9.3 C05D9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D9.3a C05D9.3a 1272   X: 1111916-1112062

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D9.3a.1 1111903 1116855 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223602   160   X: 1111903-1112062 Caenorhabditis elegans
Exon223604   108   X: 1112723-1112830 Caenorhabditis elegans
Exon223606   85   X: 1112949-1113033 Caenorhabditis elegans
Exon223608   142   X: 1113094-1113235 Caenorhabditis elegans
Exon223610   64   X: 1113281-1113344 Caenorhabditis elegans
Exon223612   123   X: 1114183-1114305 Caenorhabditis elegans
Exon223614   149   X: 1114413-1114561 Caenorhabditis elegans
Exon223616   73   X: 1115228-1115300 Caenorhabditis elegans
Exon223618   101   X: 1115382-1115482 Caenorhabditis elegans
Exon223620   70   X: 1115589-1115658 Caenorhabditis elegans
Exon223624   605   X: 1116251-1116855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D9.3a.1 1111903 1116855 1

1 Sequence

Length
1680

1 Sequence Ontology Term

Identifier Name Description
transcript