WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E7.1a.1 Sequence Name  F49E7.1a.1
Length (nt)  3428   Chromosome Location  X: 1097152-1103324
Chromosome . Primary Identifier  X Chromosome Location . Start  1097152
Chromosome Location . End  1103324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004377 rme-6 F49E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E7.1a F49E7.1a 3282   X: 1097156-1097257

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E7.1a.1 1097152 1103324 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223535   106   X: 1097152-1097257 Caenorhabditis elegans
Exon223537   87   X: 1097313-1097399 Caenorhabditis elegans
Exon223538   98   X: 1097444-1097541 Caenorhabditis elegans
Exon223540   103   X: 1097899-1098001 Caenorhabditis elegans
Exon223542   303   X: 1098045-1098347 Caenorhabditis elegans
Exon223544   109   X: 1098643-1098751 Caenorhabditis elegans
Exon223546   317   X: 1098804-1099120 Caenorhabditis elegans
Exon223549   156   X: 1099169-1099324 Caenorhabditis elegans
Exon223552   169   X: 1099654-1099822 Caenorhabditis elegans
Exon223556   435   X: 1099871-1100305 Caenorhabditis elegans
Exon223559   292   X: 1100618-1100909 Caenorhabditis elegans
Exon223563   228   X: 1100956-1101183 Caenorhabditis elegans
Exon223567   135   X: 1101472-1101606 Caenorhabditis elegans
Exon223571   226   X: 1101658-1101883 Caenorhabditis elegans
Exon223575   116   X: 1101931-1102046 Caenorhabditis elegans
Exon223579   73   X: 1102501-1102573 Caenorhabditis elegans
Exon223583   198   X: 1102649-1102846 Caenorhabditis elegans
Exon223589   277   X: 1103048-1103324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E7.1a.1 1097152 1103324 1

1 Sequence

Length
3428

1 Sequence Ontology Term

Identifier Name Description
transcript