WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A4.8d.1 Sequence Name  F55A4.8d.1
Length (nt)  1248   Chromosome Location  X: 1039751-1044292
Chromosome . Primary Identifier  X Chromosome Location . Start  1039751
Chromosome Location . End  1044292 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A4.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018860 vpat-1 F55A4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A4.8d F55A4.8d 1248   X: 1039751-1039850

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55A4.8d.1 1039751 1044292 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223424   100   X: 1039751-1039850 Caenorhabditis elegans
Exon223429   197   X: 1039900-1040096 Caenorhabditis elegans
Exon223432   140   X: 1040157-1040296 Caenorhabditis elegans
Exon223435   160   X: 1040565-1040724 Caenorhabditis elegans
Exon223438   148   X: 1040772-1040919 Caenorhabditis elegans
Exon223441   74   X: 1041059-1041132 Caenorhabditis elegans
Exon223444   219   X: 1041187-1041405 Caenorhabditis elegans
Exon223447   40   X: 1041453-1041492 Caenorhabditis elegans
Exon223450   159   X: 1041688-1041846 Caenorhabditis elegans
Exon223451   11   X: 1044282-1044292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55A4.8d.1 1039751 1044292 -1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
transcript