WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A4.5.1 Sequence Name  F55A4.5.1
Length (nt)  2687   Chromosome Location  X: 1027668-1035286
Chromosome . Primary Identifier  X Chromosome Location . Start  1027668
Chromosome Location . End  1035286 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018857 stau-1 F55A4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A4.5 F55A4.5 2118   X: 1028137-1028235

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55A4.5.1 1027668 1035286 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223391   568   X: 1027668-1028235 Caenorhabditis elegans
Exon223392   134   X: 1028378-1028511 Caenorhabditis elegans
Exon223393   186   X: 1028590-1028775 Caenorhabditis elegans
Exon223394   134   X: 1029021-1029154 Caenorhabditis elegans
Exon223395   466   X: 1029369-1029834 Caenorhabditis elegans
Exon223396   403   X: 1030505-1030907 Caenorhabditis elegans
Exon223397   218   X: 1030955-1031172 Caenorhabditis elegans
Exon223400   108   X: 1034047-1034154 Caenorhabditis elegans
Exon223401   115   X: 1034202-1034316 Caenorhabditis elegans
Exon223402   138   X: 1034367-1034504 Caenorhabditis elegans
Exon223403   217   X: 1035070-1035286 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55A4.5.1 1027668 1035286 -1

1 Sequence

Length
2687

1 Sequence Ontology Term

Identifier Name Description
transcript