WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04G9.1a.1 Sequence Name  T04G9.1a.1
Length (nt)  5214   Chromosome Location  X: 788353-796156
Chromosome . Primary Identifier  X Chromosome Location . Start  788353
Chromosome Location . End  796156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04G9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020214 attf-5 T04G9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04G9.1a T04G9.1a 4833   X: 788411-788414

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T04G9.1a.1 788353 796156 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222709   62   X: 788353-788414 Caenorhabditis elegans
Exon222711   117   X: 788482-788598 Caenorhabditis elegans
Exon222713   572   X: 789699-790270 Caenorhabditis elegans
Exon222715   93   X: 790521-790613 Caenorhabditis elegans
Exon222717   111   X: 790844-790954 Caenorhabditis elegans
Exon222719   340   X: 791016-791355 Caenorhabditis elegans
Exon222721   188   X: 791415-791602 Caenorhabditis elegans
Exon222723   233   X: 791647-791879 Caenorhabditis elegans
Exon222725   104   X: 791926-792029 Caenorhabditis elegans
Exon222727   164   X: 792087-792250 Caenorhabditis elegans
Exon222729   420   X: 792297-792716 Caenorhabditis elegans
Exon222731   2419   X: 792765-795183 Caenorhabditis elegans
Exon222733   75   X: 795233-795307 Caenorhabditis elegans
Exon222736   316   X: 795841-796156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T04G9.1a.1 788353 796156 1

1 Sequence

Length
5214

1 Sequence Ontology Term

Identifier Name Description
transcript