WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M6.1a.1 Sequence Name  M6.1a.1
Length (nt)  4317   Chromosome Location  X: 643108-654904
Chromosome . Primary Identifier  X Chromosome Location . Start  643108
Chromosome Location . End  654904 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M6.1a M6.1a 3426   X: 643682-644053

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M6.1a.1 643108 654904 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222230   946   X: 643108-644053 Caenorhabditis elegans
Exon222234   159   X: 644102-644260 Caenorhabditis elegans
Exon222240   168   X: 644309-644476 Caenorhabditis elegans
Exon222246   495   X: 644528-645022 Caenorhabditis elegans
Exon222252   111   X: 645109-645219 Caenorhabditis elegans
Exon222258   164   X: 645469-645632 Caenorhabditis elegans
Exon222265   103   X: 646206-646308 Caenorhabditis elegans
Exon222269   660   X: 646358-647017 Caenorhabditis elegans
Exon222274   92   X: 647287-647378 Caenorhabditis elegans
Exon222279   253   X: 647475-647727 Caenorhabditis elegans
Exon222284   119   X: 647773-647891 Caenorhabditis elegans
Exon222289   200   X: 648351-648550 Caenorhabditis elegans
Exon222294   217   X: 648789-649005 Caenorhabditis elegans
Exon222299   111   X: 649055-649165 Caenorhabditis elegans
Exon222304   136   X: 649372-649507 Caenorhabditis elegans
Exon222310   80   X: 650027-650106 Caenorhabditis elegans
Exon222316   85   X: 652049-652133 Caenorhabditis elegans
Exon222318   103   X: 652980-653082 Caenorhabditis elegans
Exon222321   115   X: 654790-654904 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M6.1a.1 643108 654904 -1

1 Sequence

Length
4317

1 Sequence Ontology Term

Identifier Name Description
transcript