WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M6.1a.2 Sequence Name  M6.1a.2
Length (nt)  4016   Chromosome Location  X: 643108-650108
Chromosome . Primary Identifier  X Chromosome Location . Start  643108
Chromosome Location . End  650108 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M6.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M6.1a M6.1a 3426   X: 643682-644053

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M6.1a.2 643108 650108 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222229   946   X: 643108-644053 Caenorhabditis elegans
Exon222235   159   X: 644102-644260 Caenorhabditis elegans
Exon222241   168   X: 644309-644476 Caenorhabditis elegans
Exon222247   495   X: 644528-645022 Caenorhabditis elegans
Exon222253   111   X: 645109-645219 Caenorhabditis elegans
Exon222259   164   X: 645469-645632 Caenorhabditis elegans
Exon222266   103   X: 646206-646308 Caenorhabditis elegans
Exon222270   660   X: 646358-647017 Caenorhabditis elegans
Exon222275   92   X: 647287-647378 Caenorhabditis elegans
Exon222280   253   X: 647475-647727 Caenorhabditis elegans
Exon222285   119   X: 647773-647891 Caenorhabditis elegans
Exon222290   200   X: 648351-648550 Caenorhabditis elegans
Exon222295   217   X: 648789-649005 Caenorhabditis elegans
Exon222300   111   X: 649055-649165 Caenorhabditis elegans
Exon222305   136   X: 649372-649507 Caenorhabditis elegans
Exon222313   82   X: 650027-650108 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M6.1a.2 643108 650108 -1

1 Sequence

Length
4016

1 Sequence Ontology Term

Identifier Name Description
transcript