WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C12.5e.1 Sequence Name  F57C12.5e.1
Length (nt)  4853   Chromosome Location  X: 576320-587495
Chromosome . Primary Identifier  X Chromosome Location . Start  576320
Chromosome Location . End  587495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C12.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003407 mrp-1 F57C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C12.5e F57C12.5e 4605   X: 576487-576615

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57C12.5e.1 576320 587495 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222048   296   X: 576320-576615 Caenorhabditis elegans
Exon222053   178   X: 576667-576844 Caenorhabditis elegans
Exon222058   109   X: 578102-578210 Caenorhabditis elegans
Exon222063   460   X: 578257-578716 Caenorhabditis elegans
Exon222068   133   X: 578958-579090 Caenorhabditis elegans
Exon222073   122   X: 579138-579259 Caenorhabditis elegans
Exon222078   78   X: 579310-579387 Caenorhabditis elegans
Exon222083   156   X: 580889-581044 Caenorhabditis elegans
Exon222088   155   X: 581630-581784 Caenorhabditis elegans
Exon222093   510   X: 582173-582682 Caenorhabditis elegans
Exon222098   228   X: 582738-582965 Caenorhabditis elegans
Exon222103   142   X: 583011-583152 Caenorhabditis elegans
Exon222108   374   X: 583195-583568 Caenorhabditis elegans
Exon222113   235   X: 583636-583870 Caenorhabditis elegans
Exon222118   327   X: 583916-584242 Caenorhabditis elegans
Exon222123   660   X: 584287-584946 Caenorhabditis elegans
Exon222128   257   X: 585620-585876 Caenorhabditis elegans
Exon222133   124   X: 585925-586048 Caenorhabditis elegans
Exon222138   183   X: 586205-586387 Caenorhabditis elegans
Exon222143   126   X: 587370-587495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57C12.5e.1 576320 587495 -1

1 Sequence

Length
4853

1 Sequence Ontology Term

Identifier Name Description
transcript