WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C12.5c.1 Sequence Name  F57C12.5c.1
Length (nt)  4845   Chromosome Location  X: 576318-587485
Chromosome . Primary Identifier  X Chromosome Location . Start  576318
Chromosome Location . End  587485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C12.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003407 mrp-1 F57C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C12.5c F57C12.5c 4605   X: 576487-576615

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57C12.5c.1 576318 587485 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222046   298   X: 576318-576615 Caenorhabditis elegans
Exon222051   178   X: 576667-576844 Caenorhabditis elegans
Exon222056   109   X: 578102-578210 Caenorhabditis elegans
Exon222061   460   X: 578257-578716 Caenorhabditis elegans
Exon222066   133   X: 578958-579090 Caenorhabditis elegans
Exon222071   122   X: 579138-579259 Caenorhabditis elegans
Exon222076   78   X: 579310-579387 Caenorhabditis elegans
Exon222082   156   X: 580298-580453 Caenorhabditis elegans
Exon222086   155   X: 581630-581784 Caenorhabditis elegans
Exon222091   510   X: 582173-582682 Caenorhabditis elegans
Exon222096   228   X: 582738-582965 Caenorhabditis elegans
Exon222101   142   X: 583011-583152 Caenorhabditis elegans
Exon222106   374   X: 583195-583568 Caenorhabditis elegans
Exon222111   235   X: 583636-583870 Caenorhabditis elegans
Exon222116   327   X: 583916-584242 Caenorhabditis elegans
Exon222121   660   X: 584287-584946 Caenorhabditis elegans
Exon222126   257   X: 585620-585876 Caenorhabditis elegans
Exon222131   124   X: 585925-586048 Caenorhabditis elegans
Exon222136   183   X: 586205-586387 Caenorhabditis elegans
Exon222141   116   X: 587370-587485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57C12.5c.1 576318 587485 -1

1 Sequence

Length
4845

1 Sequence Ontology Term

Identifier Name Description
transcript