WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52D1.3c.1 Sequence Name  F52D1.3c.1
Length (nt)  2502   Chromosome Location  X: 450447-457610
Chromosome . Primary Identifier  X Chromosome Location . Start  450447
Chromosome Location . End  457610 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52D1.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004127 abu-12 F52D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52D1.3c F52D1.3c 2106   X: 450650-450703

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52D1.3c.1 450447 457610 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221826   257   X: 450447-450703 Caenorhabditis elegans
Exon221830   235   X: 450755-450989 Caenorhabditis elegans
Exon221833   476   X: 451647-452122 Caenorhabditis elegans
Exon221836   138   X: 452367-452504 Caenorhabditis elegans
Exon221839   66   X: 452564-452629 Caenorhabditis elegans
Exon221841   210   X: 452673-452882 Caenorhabditis elegans
Exon221847   195   X: 454288-454482 Caenorhabditis elegans
Exon221850   117   X: 455464-455580 Caenorhabditis elegans
Exon221853   293   X: 455631-455923 Caenorhabditis elegans
Exon221856   117   X: 455975-456091 Caenorhabditis elegans
Exon221859   96   X: 456137-456232 Caenorhabditis elegans
Exon221862   302   X: 457309-457610 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52D1.3c.1 450447 457610 -1

1 Sequence

Length
2502

1 Sequence Ontology Term

Identifier Name Description
transcript