WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44A6E.1a.1 Sequence Name  Y44A6E.1a.1
Length (nt)  1693   Chromosome Location  V: 20915486-20922731
Chromosome . Primary Identifier  V Chromosome Location . Start  20915486
Chromosome Location . End  20922731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6E.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012857 pbo-5 Y44A6E.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44A6E.1a Y44A6E.1a 1515   V: 20915490-20915615

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y44A6E.1a.1 20915486 20922731 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221059   130   V: 20915486-20915615 Caenorhabditis elegans
Exon221060   67   V: 20915690-20915756 Caenorhabditis elegans
Exon221062   268   V: 20916899-20917166 Caenorhabditis elegans
Exon221065   154   V: 20917468-20917621 Caenorhabditis elegans
Exon221066   388   V: 20918433-20918820 Caenorhabditis elegans
Exon221068   155   V: 20918875-20919029 Caenorhabditis elegans
Exon221070   126   V: 20919078-20919203 Caenorhabditis elegans
Exon221072   69   V: 20919257-20919325 Caenorhabditis elegans
Exon221076   336   V: 20922396-20922731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y44A6E.1a.1 20915486 20922731 1

1 Sequence

Length
1693

1 Sequence Ontology Term

Identifier Name Description
transcript