WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25C8.3e.1 Sequence Name  F25C8.3e.1
Length (nt)  9654   Chromosome Location  V: 20879854-20898909
Chromosome . Primary Identifier  V Chromosome Location . Start  20879854
Chromosome Location . End  20898909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25C8.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006812 unc-80 F25C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25C8.3e F25C8.3e 9483   V: 20879854-20879948

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25C8.3e.1 20879854 20898909 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220850   95   V: 20879854-20879948 Caenorhabditis elegans
Exon220857   75   V: 20880662-20880736 Caenorhabditis elegans
Exon220862   49   V: 20880779-20880827 Caenorhabditis elegans
Exon220867   120   V: 20881241-20881360 Caenorhabditis elegans
Exon220872   132   V: 20881406-20881537 Caenorhabditis elegans
Exon220877   625   V: 20882809-20883433 Caenorhabditis elegans
Exon220882   270   V: 20884253-20884522 Caenorhabditis elegans
Exon220887   159   V: 20884605-20884763 Caenorhabditis elegans
Exon220892   387   V: 20885191-20885577 Caenorhabditis elegans
Exon220897   406   V: 20885622-20886027 Caenorhabditis elegans
Exon220902   224   V: 20886077-20886300 Caenorhabditis elegans
Exon220907   164   V: 20886346-20886509 Caenorhabditis elegans
Exon220912   119   V: 20886583-20886701 Caenorhabditis elegans
Exon220917   419   V: 20887734-20888152 Caenorhabditis elegans
Exon220922   161   V: 20888781-20888941 Caenorhabditis elegans
Exon220927   577   V: 20888994-20889570 Caenorhabditis elegans
Exon220932   102   V: 20889615-20889716 Caenorhabditis elegans
Exon220941   162   V: 20890252-20890413 Caenorhabditis elegans
Exon220948   337   V: 20890880-20891216 Caenorhabditis elegans
Exon220953   76   V: 20891263-20891338 Caenorhabditis elegans
Exon220961   916   V: 20891718-20892633 Caenorhabditis elegans
Exon220966   239   V: 20893261-20893499 Caenorhabditis elegans
Exon220973   87   V: 20894014-20894100 Caenorhabditis elegans
Exon220978   153   V: 20894147-20894299 Caenorhabditis elegans
Exon220983   402   V: 20894362-20894763 Caenorhabditis elegans
Exon220988   756   V: 20894834-20895589 Caenorhabditis elegans
Exon220993   290   V: 20895674-20895963 Caenorhabditis elegans
Exon220998   682   V: 20896014-20896695 Caenorhabditis elegans
Exon221003   268   V: 20896753-20897020 Caenorhabditis elegans
Exon221008   293   V: 20897076-20897368 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25C8.3e.1 20879854 20898909 1

1 Sequence

Length
9654

1 Sequence Ontology Term

Identifier Name Description
transcript