WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D8.5a.1 Sequence Name  T03D8.5a.1
Length (nt)  3498   Chromosome Location  V: 20820118-20825062
Chromosome . Primary Identifier  V Chromosome Location . Start  20820118
Chromosome Location . End  20825062 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001547 gcy-22 T03D8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D8.5a T03D8.5a 3177   V: 20820405-20820482

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T03D8.5a.1 20820118 20825062 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220673   365   V: 20820118-20820482 Caenorhabditis elegans
Exon220676   95   V: 20820527-20820621 Caenorhabditis elegans
Exon220679   274   V: 20820675-20820948 Caenorhabditis elegans
Exon220682   193   V: 20821168-20821360 Caenorhabditis elegans
Exon220685   74   V: 20821406-20821479 Caenorhabditis elegans
Exon220688   456   V: 20821527-20821982 Caenorhabditis elegans
Exon220691   261   V: 20822040-20822300 Caenorhabditis elegans
Exon220694   262   V: 20822346-20822607 Caenorhabditis elegans
Exon220697   200   V: 20822655-20822854 Caenorhabditis elegans
Exon220700   158   V: 20822960-20823117 Caenorhabditis elegans
Exon220703   141   V: 20823166-20823306 Caenorhabditis elegans
Exon220706   171   V: 20823352-20823522 Caenorhabditis elegans
Exon220709   123   V: 20823567-20823689 Caenorhabditis elegans
Exon220712   233   V: 20823733-20823965 Caenorhabditis elegans
Exon220715   133   V: 20824017-20824149 Caenorhabditis elegans
Exon220718   107   V: 20824194-20824300 Caenorhabditis elegans
Exon220723   252   V: 20824811-20825062 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T03D8.5a.1 20820118 20825062 -1

1 Sequence

Length
3498

1 Sequence Ontology Term

Identifier Name Description
transcript