WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A6.3b.1 Sequence Name  F38A6.3b.1
Length (nt)  2660   Chromosome Location  V: 20780407-20785260
Chromosome . Primary Identifier  V Chromosome Location . Start  20780407
Chromosome Location . End  20785260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A6.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001851 hif-1 F38A6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.3b F38A6.3b 2166   V: 20780502-20780521

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A6.3b.1 20780407 20785260 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220563   115   V: 20780407-20780521 Caenorhabditis elegans
Exon220567   191   V: 20781315-20781505 Caenorhabditis elegans
Exon220572   155   V: 20781632-20781786 Caenorhabditis elegans
Exon220577   315   V: 20781832-20782146 Caenorhabditis elegans
Exon220583   559   V: 20782664-20783222 Caenorhabditis elegans
Exon220590   328   V: 20783738-20784065 Caenorhabditis elegans
Exon220595   257   V: 20784136-20784392 Caenorhabditis elegans
Exon220602   173   V: 20784473-20784645 Caenorhabditis elegans
Exon220612   567   V: 20784694-20785260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A6.3b.1 20780407 20785260 1

1 Sequence

Length
2660

1 Sequence Ontology Term

Identifier Name Description
transcript