WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A6.2a.1 Sequence Name  F38A6.2a.1
Length (nt)  2743   Chromosome Location  V: 20764971-20770161
Chromosome . Primary Identifier  V Chromosome Location . Start  20764971
Chromosome Location . End  20770161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001248 elp-1 F38A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.2a F38A6.2a 2676   V: 20765009-20765131

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A6.2a.1 20764971 20770161 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220524   161   V: 20764971-20765131 Caenorhabditis elegans
Exon220526   98   V: 20765536-20765633 Caenorhabditis elegans
Exon220528   265   V: 20765682-20765946 Caenorhabditis elegans
Exon220530   315   V: 20765995-20766309 Caenorhabditis elegans
Exon220532   264   V: 20766358-20766621 Caenorhabditis elegans
Exon220534   123   V: 20766680-20766802 Caenorhabditis elegans
Exon220536   141   V: 20766848-20766988 Caenorhabditis elegans
Exon220538   337   V: 20767036-20767372 Caenorhabditis elegans
Exon220540   151   V: 20767424-20767574 Caenorhabditis elegans
Exon220542   66   V: 20767626-20767691 Caenorhabditis elegans
Exon220544   98   V: 20767740-20767837 Caenorhabditis elegans
Exon220546   81   V: 20767898-20767978 Caenorhabditis elegans
Exon220548   346   V: 20768350-20768695 Caenorhabditis elegans
Exon220550   100   V: 20768749-20768848 Caenorhabditis elegans
Exon220552   86   V: 20768899-20768984 Caenorhabditis elegans
Exon220555   111   V: 20770051-20770161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A6.2a.1 20764971 20770161 -1

1 Sequence

Length
2743

1 Sequence Ontology Term

Identifier Name Description
transcript