WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A6.1a.1 Sequence Name  F38A6.1a.1
Length (nt)  2158   Chromosome Location  V: 20753052-20760317
Chromosome . Primary Identifier  V Chromosome Location . Start  20753052
Chromosome Location . End  20760317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004013 pha-4 F38A6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.1a F38A6.1a 1521   V: 20753052-20753093

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A6.1a.1 20753052 20760317 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220501   42   V: 20753052-20753093 Caenorhabditis elegans
Exon220502   240   V: 20755341-20755580 Caenorhabditis elegans
Exon220505   66   V: 20756910-20756975 Caenorhabditis elegans
Exon220508   127   V: 20757034-20757160 Caenorhabditis elegans
Exon220511   421   V: 20757424-20757844 Caenorhabditis elegans
Exon220514   427   V: 20758157-20758583 Caenorhabditis elegans
Exon220517   164   V: 20758644-20758807 Caenorhabditis elegans
Exon220522   671   V: 20759647-20760317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A6.1a.1 20753052 20760317 1

1 Sequence

Length
2158

1 Sequence Ontology Term

Identifier Name Description
transcript