WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H6C.20.1 Sequence Name  Y38H6C.20.1
Length (nt)  2301   Chromosome Location  V: 20547235-20551196
Chromosome . Primary Identifier  V Chromosome Location . Start  20547235
Chromosome Location . End  20551196 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H6C.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012632 Y38H6C.20 Y38H6C.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H6C.20 Y38H6C.20 2211   V: 20547293-20547439

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38H6C.20.1 20547235 20551196 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219807   205   V: 20547235-20547439 Caenorhabditis elegans
Exon219808   127   V: 20547504-20547630 Caenorhabditis elegans
Exon219809   216   V: 20548070-20548285 Caenorhabditis elegans
Exon219810   245   V: 20548417-20548661 Caenorhabditis elegans
Exon219811   201   V: 20548763-20548963 Caenorhabditis elegans
Exon219812   65   V: 20549047-20549111 Caenorhabditis elegans
Exon219813   86   V: 20549161-20549246 Caenorhabditis elegans
Exon219814   169   V: 20549294-20549462 Caenorhabditis elegans
Exon219815   142   V: 20549708-20549849 Caenorhabditis elegans
Exon219816   110   V: 20549894-20550003 Caenorhabditis elegans
Exon219817   153   V: 20550054-20550206 Caenorhabditis elegans
Exon219818   121   V: 20550254-20550374 Caenorhabditis elegans
Exon219819   183   V: 20550516-20550698 Caenorhabditis elegans
Exon219820   278   V: 20550919-20551196 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38H6C.20.1 20547235 20551196 -1

1 Sequence

Length
2301

1 Sequence Ontology Term

Identifier Name Description
transcript