WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48F5.4a.1 Sequence Name  F48F5.4a.1
Length (nt)  1135   Chromosome Location  V: 20454111-20456487
Chromosome . Primary Identifier  V Chromosome Location . Start  20454111
Chromosome Location . End  20456487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48F5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005147 srd-70 F48F5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48F5.4a F48F5.4a 981   V: 20454211-20454404

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48F5.4a.1 20454111 20456487 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219614   294   V: 20454111-20454404 Caenorhabditis elegans
Exon219616   97   V: 20454450-20454546 Caenorhabditis elegans
Exon219618   141   V: 20455230-20455370 Caenorhabditis elegans
Exon219620   279   V: 20455413-20455691 Caenorhabditis elegans
Exon219622   79   V: 20456121-20456199 Caenorhabditis elegans
Exon219624   245   V: 20456243-20456487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48F5.4a.1 20454111 20456487 1

1 Sequence

Length
1135

1 Sequence Ontology Term

Identifier Name Description
transcript