WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48F5.5.1 Sequence Name  F48F5.5.1
Length (nt)  1134   Chromosome Location  V: 20425301-20431297
Chromosome . Primary Identifier  V Chromosome Location . Start  20425301
Chromosome Location . End  20431297 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48F5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001406 fce-2 F48F5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48F5.5 F48F5.5 801   V: 20425396-20425399

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48F5.5.1 20425301 20431297 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219577   99   V: 20425301-20425399 Caenorhabditis elegans
Exon219579   106   V: 20425447-20425552 Caenorhabditis elegans
Exon219580   64   V: 20425705-20425768 Caenorhabditis elegans
Exon219581   145   V: 20425929-20426073 Caenorhabditis elegans
Exon219582   59   V: 20427372-20427430 Caenorhabditis elegans
Exon219583   178   V: 20427691-20427868 Caenorhabditis elegans
Exon219584   135   V: 20429956-20430090 Caenorhabditis elegans
Exon219585   348   V: 20430950-20431297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48F5.5.1 20425301 20431297 1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
transcript