Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y38H6A.9 | Y38H6A.9 |
60
 |
V: 20339032-20339091 |
Other
9 Allele
| Public Name |
|---|
| gk963271 |
| WBVar02124844 |
| gk964176 |
| gk962705 |
| gk963489 |
| gk963304 |
| WBVar02122714 |
| WBVar02124642 |
| gk963809 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00199299 | 20339032 | 20339091 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_20338333..20339031 | 699 | V: 20338333-20339031 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed higher expression in neurons isolated from male day 2 vs day 8. | DESeq2 analysis was then employed for read normalization and differential expression analysis of the counted reads. PCA analysiswas performed along with the DESeq2 package. Genes with a log2(fold-change) > 1 and p-adjusted < 0.05 were considered differentially expressed in subsequent analysis. | WBPaper00066831:male-neuron_aging_downregulated | |
| Transcripts that showed significantly increased expression in animals fed with JM103 bacteria producing Cry5B, comparing to control animals fed with JM103. | ANOVA, p-value < 0.05. | WBPaper00056167:Cry5B_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_20339092..20345188 | 6097 | V: 20339092-20345188 | Caenorhabditis elegans |
