WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014614 Gene Name  Y113G7B.t1
Sequence Name  ? Y113G7B.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by clk-1 based on microarray studies. Biotype  SO:0001272
Genetic Position  :± Length (nt)  ? 70
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014614

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7B.t1 Y113G7B.t1 70   V: 20219301-20219370
 

Other

0 CDSs

0 RNAi Result

33 Allele

Public Name
gk963271
WBVar02124844
gk964176
gk962705
gk963489
gk963304
WBVar02122714
WBVar02124642
gk963809
WBVar02123725
gk962663
WBVar02121335
WBVar02120537
WBVar02123547
WBVar02122046
WBVar02122277
WBVar00091153
WBVar02120732
WBVar00091264
WBVar02120877
WBVar02122976
WBVar01829708
WBVar01678646
WBVar01678645
WBVar01678647
WBVar01753621
WBVar01753620
gk739813
gk618706
WBVar01525892

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014614 20219301 20219370 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_20219371..20224855   5485 V: 20219371-20224855 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Up-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. WBPaper00045774:clk-1_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014614 20219301 20219370 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
70

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_20219149..20219300   152 V: 20219149-20219300 Caenorhabditis elegans