WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7A.4b.1 Sequence Name  Y113G7A.4b.1
Length (nt)  2622   Chromosome Location  V: 20105804-20120656
Chromosome . Primary Identifier  V Chromosome Location . Start  20105804
Chromosome Location . End  20120656 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003566 ncx-1 Y113G7A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7A.4b Y113G7A.4b 2622   V: 20105804-20106005

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7A.4b.1 20105804 20120656 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219055   202   V: 20105804-20106005 Caenorhabditis elegans
Exon219057   157   V: 20108305-20108461 Caenorhabditis elegans
Exon219059   147   V: 20109280-20109426 Caenorhabditis elegans
Exon219061   283   V: 20110428-20110710 Caenorhabditis elegans
Exon219063   106   V: 20111396-20111501 Caenorhabditis elegans
Exon219065   366   V: 20112220-20112585 Caenorhabditis elegans
Exon219067   81   V: 20113771-20113851 Caenorhabditis elegans
Exon219069   153   V: 20113970-20114122 Caenorhabditis elegans
Exon219071   226   V: 20115837-20116062 Caenorhabditis elegans
Exon219073   128   V: 20117107-20117234 Caenorhabditis elegans
Exon219075   221   V: 20118031-20118251 Caenorhabditis elegans
Exon219077   213   V: 20118648-20118860 Caenorhabditis elegans
Exon219079   153   V: 20119654-20119806 Caenorhabditis elegans
Exon219082   102   V: 20120243-20120344 Caenorhabditis elegans
Exon219083   84   V: 20120573-20120656 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7A.4b.1 20105804 20120656 -1

1 Sequence

Length
2622

1 Sequence Ontology Term

Identifier Name Description
transcript