WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7A.6a.1 Sequence Name  Y113G7A.6a.1
Length (nt)  1539   Chromosome Location  V: 20053720-20064176
Chromosome . Primary Identifier  V Chromosome Location . Start  20053720
Chromosome Location . End  20064176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006652 ttx-1 Y113G7A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7A.6a Y113G7A.6a 1176   V: 20054081-20054184

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y113G7A.6a.1 20053720 20064176 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218976   465   V: 20053720-20054184 Caenorhabditis elegans
Exon218978   248   V: 20055639-20055886 Caenorhabditis elegans
Exon218982   92   V: 20056116-20056207 Caenorhabditis elegans
Exon218986   151   V: 20056863-20057013 Caenorhabditis elegans
Exon218990   224   V: 20057135-20057358 Caenorhabditis elegans
Exon218994   159   V: 20058543-20058701 Caenorhabditis elegans
Exon218997   69   V: 20059485-20059553 Caenorhabditis elegans
Exon219002   81   V: 20059674-20059754 Caenorhabditis elegans
Exon219007   50   V: 20064127-20064176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y113G7A.6a.1 20053720 20064176 -1

1 Sequence

Length
1539

1 Sequence Ontology Term

Identifier Name Description
transcript