WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116F11B.12a.2 Sequence Name  Y116F11B.12a.2
Length (nt)  2065   Chromosome Location  V: 19881372-19892673
Chromosome . Primary Identifier  V Chromosome Location . Start  19881372
Chromosome Location . End  19892673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11B.12a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001629 gly-4 Y116F11B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116F11B.12a Y116F11B.12a 1770   V: 19881656-19881751

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y116F11B.12a.2 19881372 19892673 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218719   380   V: 19881372-19881751 Caenorhabditis elegans
Exon218722   75   V: 19882447-19882521 Caenorhabditis elegans
Exon218725   241   V: 19882807-19883047 Caenorhabditis elegans
Exon218732   84   V: 19887180-19887263 Caenorhabditis elegans
Exon218736   93   V: 19887408-19887500 Caenorhabditis elegans
Exon218740   319   V: 19888337-19888655 Caenorhabditis elegans
Exon218744   532   V: 19890464-19890995 Caenorhabditis elegans
Exon218748   222   V: 19892170-19892391 Caenorhabditis elegans
Exon218754   119   V: 19892555-19892673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y116F11B.12a.2 19881372 19892673 -1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript