WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116F11B.3.1 Sequence Name  Y116F11B.3.1
Length (nt)  3152   Chromosome Location  V: 19822751-19830099
Chromosome . Primary Identifier  V Chromosome Location . Start  19822751
Chromosome Location . End  19830099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003959 pcp-4 Y116F11B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116F11B.3 Y116F11B.3 3129   V: 19822765-19823242

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y116F11B.3.1 19822751 19830099 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218632   492   V: 19822751-19823242 Caenorhabditis elegans
Exon218633   765   V: 19824288-19825052 Caenorhabditis elegans
Exon218635   841   V: 19826544-19827384 Caenorhabditis elegans
Exon218639   187   V: 19828028-19828214 Caenorhabditis elegans
Exon218641   481   V: 19828814-19829294 Caenorhabditis elegans
Exon218643   386   V: 19829714-19830099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y116F11B.3.1 19822751 19830099 -1

1 Sequence

Length
3152

1 Sequence Ontology Term

Identifier Name Description
transcript