WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1d.1 Sequence Name  Y43F8B.1d.1
Length (nt)  2136   Chromosome Location  V: 19535111-19546168
Chromosome . Primary Identifier  V Chromosome Location . Start  19535111
Chromosome Location . End  19546168 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1d Y43F8B.1d 2136   V: 19535111-19535155

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.1d.1 19535111 19546168 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218128   45   V: 19535111-19535155 Caenorhabditis elegans
Exon218136   21   V: 19535883-19535903 Caenorhabditis elegans
Exon218145   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218154   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218163   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218172   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218181   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218190   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218200   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218207   132   V: 19543944-19544075 Caenorhabditis elegans
Exon218214   911   V: 19544534-19545444 Caenorhabditis elegans
Exon218220   112   V: 19545493-19545604 Caenorhabditis elegans
Exon218227   122   V: 19545654-19545775 Caenorhabditis elegans
Exon218228   13   V: 19546156-19546168 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.1d.1 19535111 19546168 -1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript