WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.3a.1 Sequence Name  Y43F8B.3a.1
Length (nt)  3820   Chromosome Location  V: 19503108-19520005
Chromosome . Primary Identifier  V Chromosome Location . Start  19503108
Chromosome Location . End  19520005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012814 Y43F8B.3 Y43F8B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.3a Y43F8B.3a 3537   V: 19503112-19503304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3a.1 19503108 19520005 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217943   197   V: 19503108-19503304 Caenorhabditis elegans
Exon217947   82   V: 19503754-19503835 Caenorhabditis elegans
Exon217955   107   V: 19503998-19504104 Caenorhabditis elegans
Exon217964   165   V: 19505895-19506059 Caenorhabditis elegans
Exon217968   193   V: 19506371-19506563 Caenorhabditis elegans
Exon217976   110   V: 19507286-19507395 Caenorhabditis elegans
Exon217984   144   V: 19507691-19507834 Caenorhabditis elegans
Exon217992   688   V: 19508974-19509661 Caenorhabditis elegans
Exon217999   254   V: 19510027-19510280 Caenorhabditis elegans
Exon218018   312   V: 19513942-19514253 Caenorhabditis elegans
Exon218025   168   V: 19514355-19514522 Caenorhabditis elegans
Exon218048   138   V: 19515764-19515901 Caenorhabditis elegans
Exon218056   716   V: 19516052-19516767 Caenorhabditis elegans
Exon218064   85   V: 19516824-19516908 Caenorhabditis elegans
Exon218083   77   V: 19519080-19519156 Caenorhabditis elegans
Exon218093   384   V: 19519622-19520005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3a.1 19503108 19520005 1

1 Sequence

Length
3820

1 Sequence Ontology Term

Identifier Name Description
transcript