WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8A.5.1 Sequence Name  Y43F8A.5.1
Length (nt)  1670   Chromosome Location  V: 19384819-19390129
Chromosome . Primary Identifier  V Chromosome Location . Start  19384819
Chromosome Location . End  19390129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012811 slcr-46.2 Y43F8A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8A.5 Y43F8A.5 1428   V: 19385052-19385226

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8A.5.1 19384819 19390129 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217663   408   V: 19384819-19385226 Caenorhabditis elegans
Exon217664   157   V: 19385835-19385991 Caenorhabditis elegans
Exon217665   234   V: 19386231-19386464 Caenorhabditis elegans
Exon217666   184   V: 19386533-19386716 Caenorhabditis elegans
Exon217668   167   V: 19387686-19387852 Caenorhabditis elegans
Exon217669   163   V: 19388049-19388211 Caenorhabditis elegans
Exon217670   151   V: 19388484-19388634 Caenorhabditis elegans
Exon217671   113   V: 19389818-19389930 Caenorhabditis elegans
Exon217672   93   V: 19390037-19390129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8A.5.1 19384819 19390129 -1

1 Sequence

Length
1670

1 Sequence Ontology Term

Identifier Name Description
transcript