WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.2a.1 Sequence Name  Y39B6A.2a.1
Length (nt)  1848   Chromosome Location  V: 19190547-19199272
Chromosome . Primary Identifier  V Chromosome Location . Start  19190547
Chromosome Location . End  19199272 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012665 pph-5 Y39B6A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.2a Y39B6A.2a 1491   V: 19190555-19190678

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.2a.1 19190547 19199272 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217360   132   V: 19190547-19190678 Caenorhabditis elegans
Exon217361   248   V: 19190737-19190984 Caenorhabditis elegans
Exon217362   180   V: 19191616-19191795 Caenorhabditis elegans
Exon217363   243   V: 19192465-19192707 Caenorhabditis elegans
Exon217364   249   V: 19193537-19193785 Caenorhabditis elegans
Exon217365   110   V: 19195235-19195344 Caenorhabditis elegans
Exon217367   253   V: 19196899-19197151 Caenorhabditis elegans
Exon217370   433   V: 19198840-19199272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.2a.1 19190547 19199272 1

1 Sequence

Length
1848

1 Sequence Ontology Term

Identifier Name Description
transcript