WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.48b.1 Sequence Name  Y39B6A.48b.1
Length (nt)  772   Chromosome Location  V: 19185173-19187820
Chromosome . Primary Identifier  V Chromosome Location . Start  19185173
Chromosome Location . End  19187820 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.48b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001987 hot-2 Y39B6A.48 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.48b Y39B6A.48b 600   V: 19185178-19185286

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.48b.1 19185173 19187820 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217343   114   V: 19185173-19185286 Caenorhabditis elegans
Exon217345   104   V: 19185594-19185697 Caenorhabditis elegans
Exon217347   103   V: 19186541-19186643 Caenorhabditis elegans
Exon217349   101   V: 19186799-19186899 Caenorhabditis elegans
Exon217350   350   V: 19187471-19187820 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.48b.1 19185173 19187820 1

1 Sequence

Length
772

1 Sequence Ontology Term

Identifier Name Description
transcript