WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39B6A.48a Sequence Name  Y39B6A.48a
Length (nt)  864   Chromosome Location  V: 19174806-19175178
Chromosome . Primary Identifier  V Chromosome Location . Start  19174806
Chromosome Location . End  19175178
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.48a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44849 HOT-2, isoform a 32.7 287 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056198
WBRNAi00056199
WBRNAi00056209
WBRNAi00020375
WBRNAi00020377

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y39B6A.48a 19174806 19175178 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001987 hot-2 Y39B6A.48 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y39B6A.48a 19174806 19175178 1
CDS:Y39B6A.48a 19185594 19185697 1
CDS:Y39B6A.48a 19186541 19186643 1
CDS:Y39B6A.48a 19186799 19186899 1
CDS:Y39B6A.48a 19187471 19187653 1

1 Sequence

Length
864

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39B6A.48a.1 Y39B6A.48a.1 1169   V: 19174759-19187911