WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.47a.1 Sequence Name  Y39B6A.47a.1
Length (nt)  1258   Chromosome Location  V: 19087723-19092668
Chromosome . Primary Identifier  V Chromosome Location . Start  19087723
Chromosome Location . End  19092668 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.47a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012703 nhr-145 Y39B6A.47 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.47a Y39B6A.47a 1224   V: 19087724-19087890

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.47a.1 19087723 19092668 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217232   168   V: 19087723-19087890 Caenorhabditis elegans
Exon217233   59   V: 19088605-19088663 Caenorhabditis elegans
Exon217235   173   V: 19088710-19088882 Caenorhabditis elegans
Exon217237   147   V: 19090257-19090403 Caenorhabditis elegans
Exon217239   216   V: 19090488-19090703 Caenorhabditis elegans
Exon217241   95   V: 19091304-19091398 Caenorhabditis elegans
Exon217243   116   V: 19091676-19091791 Caenorhabditis elegans
Exon217245   152   V: 19091986-19092137 Caenorhabditis elegans
Exon217248   132   V: 19092537-19092668 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.47a.1 19087723 19092668 1

1 Sequence

Length
1258

1 Sequence Ontology Term

Identifier Name Description
transcript