WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.40a.1 Sequence Name  Y39B6A.40a.1
Length (nt)  977   Chromosome Location  V: 18979320-18981479
Chromosome . Primary Identifier  V Chromosome Location . Start  18979320
Chromosome Location . End  18981479 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.40a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012698 sws-1 Y39B6A.40 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.40a Y39B6A.40a 576   V: 18979382-18979624

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.40a.1 18979320 18981479 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217070   305   V: 18979320-18979624 Caenorhabditis elegans
Exon217077   207   V: 18980721-18980927 Caenorhabditis elegans
Exon217083   99   V: 18980973-18981071 Caenorhabditis elegans
Exon217088   366   V: 18981114-18981479 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.40a.1 18979320 18981479 -1

1 Sequence

Length
977

1 Sequence Ontology Term

Identifier Name Description
transcript