WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.43a.1 Sequence Name  Y39B6A.43a.1
Length (nt)  2348   Chromosome Location  V: 18960964-18967823
Chromosome . Primary Identifier  V Chromosome Location . Start  18960964
Chromosome Location . End  18967823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.43a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012701 Y39B6A.43 Y39B6A.43 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.43a Y39B6A.43a 2175   V: 18961101-18961416

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.43a.1 18960964 18967823 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217024   453   V: 18960964-18961416 Caenorhabditis elegans
Exon217027   198   V: 18961551-18961748 Caenorhabditis elegans
Exon217030   306   V: 18963637-18963942 Caenorhabditis elegans
Exon217033   137   V: 18964000-18964136 Caenorhabditis elegans
Exon217036   144   V: 18964297-18964440 Caenorhabditis elegans
Exon217039   185   V: 18964911-18965095 Caenorhabditis elegans
Exon217042   150   V: 18965480-18965629 Caenorhabditis elegans
Exon217045   165   V: 18966282-18966446 Caenorhabditis elegans
Exon217049   349   V: 18966505-18966853 Caenorhabditis elegans
Exon217051   113   V: 18967507-18967619 Caenorhabditis elegans
Exon217053   148   V: 18967676-18967823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39B6A.43a.1 18960964 18967823 -1

1 Sequence

Length
2348

1 Sequence Ontology Term

Identifier Name Description
transcript