WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y80D3A.7a.1 Sequence Name  Y80D3A.7a.1
Length (nt)  2772   Chromosome Location  V: 18919221-18931379
Chromosome . Primary Identifier  V Chromosome Location . Start  18919221
Chromosome Location . End  18931379 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004236 ptr-22 Y80D3A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y80D3A.7a Y80D3A.7a 2667   V: 18919319-18919460

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y80D3A.7a.1 18919221 18931379 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216971   240   V: 18919221-18919460 Caenorhabditis elegans
Exon216973   95   V: 18919512-18919606 Caenorhabditis elegans
Exon216975   132   V: 18921190-18921321 Caenorhabditis elegans
Exon216977   340   V: 18922114-18922453 Caenorhabditis elegans
Exon216982   628   V: 18923679-18924306 Caenorhabditis elegans
Exon216984   190   V: 18925304-18925493 Caenorhabditis elegans
Exon216986   328   V: 18926347-18926674 Caenorhabditis elegans
Exon216989   338   V: 18927752-18928089 Caenorhabditis elegans
Exon216990   216   V: 18929263-18929478 Caenorhabditis elegans
Exon216991   108   V: 18930926-18931033 Caenorhabditis elegans
Exon216992   157   V: 18931223-18931379 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y80D3A.7a.1 18919221 18931379 -1

1 Sequence

Length
2772

1 Sequence Ontology Term

Identifier Name Description
transcript