WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y80D3A.2a.1 Sequence Name  Y80D3A.2a.1
Length (nt)  4875   Chromosome Location  V: 18860285-18894974
Chromosome . Primary Identifier  V Chromosome Location . Start  18860285
Chromosome Location . End  18894974 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001258 emb-4 Y80D3A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y80D3A.2a Y80D3A.2a 4404   V: 18860750-18860898

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y80D3A.2a.1 18860285 18894974 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216923   614   V: 18860285-18860898 Caenorhabditis elegans
Exon216927   178   V: 18861692-18861869 Caenorhabditis elegans
Exon216929   303   V: 18864883-18865185 Caenorhabditis elegans
Exon216933   171   V: 18867290-18867460 Caenorhabditis elegans
Exon216934   96   V: 18868111-18868206 Caenorhabditis elegans
Exon216936   76   V: 18870906-18870981 Caenorhabditis elegans
Exon216937   341   V: 18872626-18872966 Caenorhabditis elegans
Exon216940   132   V: 18877016-18877147 Caenorhabditis elegans
Exon216941   129   V: 18877193-18877321 Caenorhabditis elegans
Exon216942   479   V: 18879047-18879525 Caenorhabditis elegans
Exon216943   378   V: 18881551-18881928 Caenorhabditis elegans
Exon216944   236   V: 18884423-18884658 Caenorhabditis elegans
Exon216945   271   V: 18885847-18886117 Caenorhabditis elegans
Exon216946   279   V: 18886731-18887009 Caenorhabditis elegans
Exon216948   225   V: 18889773-18889997 Caenorhabditis elegans
Exon216949   249   V: 18892425-18892673 Caenorhabditis elegans
Exon216950   308   V: 18893450-18893757 Caenorhabditis elegans
Exon216951   335   V: 18894496-18894830 Caenorhabditis elegans
Exon216952   75   V: 18894900-18894974 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y80D3A.2a.1 18860285 18894974 -1

1 Sequence

Length
4875

1 Sequence Ontology Term

Identifier Name Description
transcript