WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54E10.5.1 Sequence Name  C54E10.5.1
Length (nt)  1315   Chromosome Location  V: 18796061-18800826
Chromosome . Primary Identifier  V Chromosome Location . Start  18796061
Chromosome Location . End  18800826 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008309 nhr-170 C54E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54E10.5 C54E10.5 1263   V: 18796106-18796484

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54E10.5.1 18796061 18800826 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216808   424   V: 18796061-18796484 Caenorhabditis elegans
Exon216809   95   V: 18797249-18797343 Caenorhabditis elegans
Exon216810   96   V: 18797392-18797487 Caenorhabditis elegans
Exon216811   219   V: 18797750-18797968 Caenorhabditis elegans
Exon216812   212   V: 18799641-18799852 Caenorhabditis elegans
Exon216813   137   V: 18800508-18800644 Caenorhabditis elegans
Exon216814   132   V: 18800695-18800826 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54E10.5.1 18796061 18800826 -1

1 Sequence

Length
1315

1 Sequence Ontology Term

Identifier Name Description
transcript