Other
21 Allele
| Public Name |
|---|
| gk963271 |
| gk963489 |
| gk963304 |
| gk963809 |
| gk963637 |
| gk962704 |
| WBVar02121660 |
| WBVar02124736 |
| WBVar02120716 |
| WBVar02124434 |
| gk963970 |
| gk963971 |
| WBVar02120865 |
| WBVar02124140 |
| WBVar02121045 |
| gk903298 |
| gk495595 |
| gk961162 |
| WBVar00596633 |
| WBVar01638124 |
| WBVar01813378 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00077647 | 18315050 | 18315251 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_18311986..18315049 | 3064 | V: 18311986-18315049 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Coexpression clique No. 203, sre-33-ZK1025.1_8337, on the genome-wide coexpression clique map for the nematode GPL200 platform. | All available microarray datasets for the GPL200 platform (Affymetrix C. elegans Genome Array) were obtained from the GEO repository. This included 2243 individual microarray experiments. These were normalized against each other with the software RMAexpress (Bolstad, 2014). Based on these normalized values, Pearsons correlation coefficients were obtained for each probe-probe pair of the 22,620 probes represented on this array type. The resulting list of correlation coefficients was then ranked to generate the ranked coexpression database with information on each probe represented on the GPL200 platform. | WBPaper00061527:sre-33-ZK1025.1_8337 | |
| Transcripts that showed significantly decreased expression in mrps-5(RNAi) comparing to in control animals. | Fold change > 4, p-value < 0.01 | WBPaper00056330:mrps-5(RNAi)_downregulated | |
| Genome-wide analysis of developmental and sex-regulated gene expression profile. | self-organizing map | cgc4489_group_13 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_18315252..18317749 | 2498 | V: 18315252-18317749 | Caenorhabditis elegans |
