WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06H5.6a.1 Sequence Name  C06H5.6a.1
Length (nt)  1805   Chromosome Location  V: 17879818-17888984
Chromosome . Primary Identifier  V Chromosome Location . Start  17879818
Chromosome Location . End  17888984 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06H5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007394 C06H5.6 C06H5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06H5.6a C06H5.6a 1671   V: 17879931-17880170

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06H5.6a.1 17879818 17888984 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214813   353   V: 17879818-17880170 Caenorhabditis elegans
Exon214815   93   V: 17882396-17882488 Caenorhabditis elegans
Exon214818   301   V: 17882795-17883095 Caenorhabditis elegans
Exon214821   165   V: 17883582-17883746 Caenorhabditis elegans
Exon214824   257   V: 17884607-17884863 Caenorhabditis elegans
Exon214828   170   V: 17885043-17885212 Caenorhabditis elegans
Exon214830   104   V: 17887283-17887386 Caenorhabditis elegans
Exon214832   89   V: 17887439-17887527 Caenorhabditis elegans
Exon214834   129   V: 17888661-17888789 Caenorhabditis elegans
Exon214837   144   V: 17888841-17888984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06H5.6a.1 17879818 17888984 -1

1 Sequence

Length
1805

1 Sequence Ontology Term

Identifier Name Description
transcript