WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00077494 Gene Name  F28B1.12
Sequence Name  ? F28B1.12 Organism  Caenorhabditis elegans
Automated Description  Is affected by dpy-21 based on RNA-seq studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 603
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00077494

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

41 Allele

Public Name
gk963271
gk963489
gk963304
WBVar02123303
gk964050
gk963587
gk963588
WBVar02124497
WBVar02124059
WBVar02124270
WBVar02121796
WBVar02123142
WBVar02124430
WBVar02122255
gk962630
WBVar02124910
WBVar02121640
WBVar02123709
tm10608
WBVar01652886
otn18382
h4365
WBVar00044540
WBVar01779712
WBVar01998223
WBVar01843882
WBVar02096360
WBVar01636009
WBVar01636012
WBVar01636011

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00077494 17051015 17051617 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_17051618..17052003   386 V: 17051618-17052003 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in dpy-21(e428) comparing to in N2 during L3 stage. DESeq v1.6.3. Fold change > 1.5. WBPaper00050370:dpy-21(e428)_L3_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00077494 17051015 17051617 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
603

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_17049827..17051014   1188 V: 17049827-17051014 Caenorhabditis elegans